Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 TOMM22P5-201ENST00000416399 439 ntBASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 KRT17P7-201ENST00000451704 1104 ntBASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AL365209.1-201ENST00000624418 6473 ntBASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 KRT18P64-201ENST00000434946 1219 ntBASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AC036164.1-201ENST00000570544 333 ntBASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.1□□□□□ -0.15
CLCF1Q9UBD9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 AL662844.4-201ENST00000606367 2838 ntBASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 INE1-201ENST00000456273 945 ntBASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 RN7SL752P-201ENST00000463779 287 ntBASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 RN7SL399P-201ENST00000471648 279 ntBASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 CTBP2P3-201ENST00000585629 1255 ntBASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 TMEM261P1-201ENST00000604899 340 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms