Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF41Q9H4P4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 AC002472.2-201ENST00000442739 958 ntBASIC18.69■□□□□ 0.58
RNF41Q9H4P4 SPTLC1P1-201ENST00000447199 261 ntBASIC18.69■□□□□ 0.58
RNF41Q9H4P4 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.69■□□□□ 0.58
RNF41Q9H4P4 SPDYE18-201ENST00000510091 1050 ntBASIC18.69■□□□□ 0.58
RNF41Q9H4P4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF41Q9H4P4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 AC236430.1-201ENST00000402231 743 ntBASIC18.68■□□□□ 0.58
RNF41Q9H4P4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 DOC2GP-202ENST00000514950 1163 ntBASIC18.68■□□□□ 0.58
RNF41Q9H4P4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF41Q9H4P4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 MIR661-201ENST00000384842 89 ntBASIC18.67■□□□□ 0.58
RNF41Q9H4P4 TOMM22P5-201ENST00000416399 439 ntBASIC18.67■□□□□ 0.58
RNF41Q9H4P4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 MEIS3P1-201ENST00000495167 958 ntBASIC18.67■□□□□ 0.58
RNF41Q9H4P4 TERF1P3-201ENST00000505638 1227 ntBASIC18.67■□□□□ 0.58
RNF41Q9H4P4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 AF228730.6-201ENST00000641497 218 ntBASIC18.67■□□□□ 0.58
RNF41Q9H4P4 AC084121.3-201ENST00000641716 218 ntBASIC18.67■□□□□ 0.58
RNF41Q9H4P4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF41Q9H4P4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms