Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC16.11■□□□□ 0.17
PHOX2BQ99453 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHOX2BQ99453 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PHOX2BQ99453 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 AC004898.1-201ENST00000451057 766 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 Z93015.1-201ENST00000451718 390 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 AC104784.1-201ENST00000473096 294 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 AC106760.1-201ENST00000508690 800 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 AC245884.6-201ENST00000515672 1067 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 IQSEC3P1-201ENST00000538799 536 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 KRT90P-201ENST00000549264 1064 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 AC074044.1-201ENST00000609673 707 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 PCDHB19P-201ENST00000570871 2371 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 LYSMD4-203ENST00000378904 2122 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHOX2BQ99453 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.1■□□□□ 0.17
PHOX2BQ99453 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PHOX2BQ99453 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHOX2BQ99453 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.09■□□□□ 0.17
PHOX2BQ99453 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms