Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 AP000842.3-202ENST00000569238 1080 ntBASIC15.1■□□□□ 0.01
COL21A1Q96P44 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AC006538.3-201ENST00000612495 578 ntBASIC15.09■□□□□ 0.01
COL21A1Q96P44 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
COL21A1Q96P44 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL21A1Q96P44 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
COL21A1Q96P44 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
COL21A1Q96P44 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL21A1Q96P44 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.08■□□□□ 0.01
COL21A1Q96P44 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL21A1Q96P44 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
COL21A1Q96P44 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL21A1Q96P44 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.08■□□□□ 0.01
COL21A1Q96P44 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL21A1Q96P44 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
COL21A1Q96P44 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 MIR346-201ENST00000362234 95 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 AL627223.1-201ENST00000416693 442 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 KRT18P32-201ENST00000424695 1287 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 AC098859.1-201ENST00000502915 1238 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.08■□□□□ 0
COL21A1Q96P44 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
COL21A1Q96P44 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 AL365330.1-201ENST00000607459 531 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 GPALPP1-207ENST00000611650 899 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms