Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ITCHQ96J02 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ITCHQ96J02 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
ITCHQ96J02 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
ITCHQ96J02 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ITCHQ96J02 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ITCHQ96J02 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.2■□□□□ 0.02
ITCHQ96J02 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.2■□□□□ 0.02
ITCHQ96J02 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.2■□□□□ 0.02
ITCHQ96J02 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ITCHQ96J02 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 MRPL3P1-201ENST00000400109 1033 ntBASIC15.2■□□□□ 0.02
ITCHQ96J02 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.2■□□□□ 0.02
ITCHQ96J02 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 AC098859.1-201ENST00000502915 1238 ntBASIC15.2■□□□□ 0.02
ITCHQ96J02 RNA5SP419-201ENST00000515908 135 ntBASIC15.2■□□□□ 0.02
ITCHQ96J02 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.2■□□□□ 0.02
ITCHQ96J02 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.2■□□□□ 0.02
ITCHQ96J02 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.2■□□□□ 0.02
ITCHQ96J02 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.2■□□□□ 0.02
ITCHQ96J02 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
ITCHQ96J02 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ITCHQ96J02 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ITCHQ96J02 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ITCHQ96J02 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ITCHQ96J02 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ITCHQ96J02 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.19■□□□□ 0.02
ITCHQ96J02 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.19■□□□□ 0.02
ITCHQ96J02 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
ITCHQ96J02 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 AL161772.1-201ENST00000610494 4412 ntBASIC15.19■□□□□ 0.02
ITCHQ96J02 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.19■□□□□ 0.02
ITCHQ96J02 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 AC002056.1-201ENST00000395613 760 ntBASIC15.19■□□□□ 0.02
ITCHQ96J02 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.19■□□□□ 0.02
ITCHQ96J02 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.19■□□□□ 0.02
ITCHQ96J02 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ITCHQ96J02 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.19■□□□□ 0.02
ITCHQ96J02 AL662844.1-201ENST00000546340 181 ntBASIC15.19■□□□□ 0.02
ITCHQ96J02 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ITCHQ96J02 AC018845.2-201ENST00000568326 409 ntBASIC15.19■□□□□ 0.02
ITCHQ96J02 AC068137.2-201ENST00000605408 478 ntBASIC15.19■□□□□ 0.02
ITCHQ96J02 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.19■□□□□ 0.02
ITCHQ96J02 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.19■□□□□ 0.02
ITCHQ96J02 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.19■□□□□ 0.02
ITCHQ96J02 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ITCHQ96J02 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms