Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.9■□□□□ 0.14
SHDQ96IW2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.9■□□□□ 0.14
SHDQ96IW2 RN7SL769P-201ENST00000469386 295 ntBASIC15.9■□□□□ 0.14
SHDQ96IW2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.9■□□□□ 0.14
SHDQ96IW2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SHDQ96IW2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.9■□□□□ 0.14
SHDQ96IW2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.9■□□□□ 0.14
SHDQ96IW2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.9■□□□□ 0.14
SHDQ96IW2 NDUFV2P1-201ENST00000596415 907 ntBASIC15.9■□□□□ 0.14
SHDQ96IW2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.9■□□□□ 0.14
SHDQ96IW2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.9■□□□□ 0.14
SHDQ96IW2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHDQ96IW2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.9■□□□□ 0.14
SHDQ96IW2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHDQ96IW2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHDQ96IW2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHDQ96IW2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHDQ96IW2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.9■□□□□ 0.14
SHDQ96IW2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SHDQ96IW2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SHDQ96IW2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SHDQ96IW2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.89■□□□□ 0.13
SHDQ96IW2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.89■□□□□ 0.13
SHDQ96IW2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.89■□□□□ 0.13
SHDQ96IW2 MPRIPP1-201ENST00000452433 1089 ntBASIC15.89■□□□□ 0.13
SHDQ96IW2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.89■□□□□ 0.13
SHDQ96IW2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.89■□□□□ 0.13
SHDQ96IW2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.89■□□□□ 0.13
SHDQ96IW2 MIR3619-201ENST00000579667 83 ntBASIC15.89■□□□□ 0.13
SHDQ96IW2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.89■□□□□ 0.13
SHDQ96IW2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.89■□□□□ 0.13
SHDQ96IW2 AC141586.5-201ENST00000624546 2050 ntBASIC15.89■□□□□ 0.13
SHDQ96IW2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHDQ96IW2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.89■□□□□ 0.13
SHDQ96IW2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.89■□□□□ 0.13
SHDQ96IW2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.89■□□□□ 0.13
SHDQ96IW2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.89■□□□□ 0.13
SHDQ96IW2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHDQ96IW2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.89■□□□□ 0.13
SHDQ96IW2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.88■□□□□ 0.13
SHDQ96IW2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SHDQ96IW2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.88■□□□□ 0.13
SHDQ96IW2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SHDQ96IW2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SHDQ96IW2 TPM3P8-201ENST00000330554 643 ntBASIC15.88■□□□□ 0.13
SHDQ96IW2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 MIR663B-201ENST00000408361 115 ntBASIC15.88■□□□□ 0.13
SHDQ96IW2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 HINT2P1-201ENST00000419438 481 ntBASIC15.88■□□□□ 0.13
SHDQ96IW2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.88■□□□□ 0.13
SHDQ96IW2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.88■□□□□ 0.13
SHDQ96IW2 AC126915.1-201ENST00000522847 1038 ntBASIC15.88■□□□□ 0.13
SHDQ96IW2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.88■□□□□ 0.13
SHDQ96IW2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.88■□□□□ 0.13
SHDQ96IW2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.88■□□□□ 0.13
SHDQ96IW2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.88■□□□□ 0.13
SHDQ96IW2 AC097359.3-201ENST00000603982 1210 ntBASIC15.88■□□□□ 0.13
SHDQ96IW2 AL096828.3-201ENST00000615354 462 ntBASIC15.88■□□□□ 0.13
SHDQ96IW2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.88■□□□□ 0.13
SHDQ96IW2 AL138799.1-201ENST00000448213 1675 ntBASIC15.88■□□□□ 0.13
SHDQ96IW2 AL354989.2-201ENST00000435838 1540 ntBASIC15.88■□□□□ 0.13
SHDQ96IW2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHDQ96IW2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHDQ96IW2 PP12613-201ENST00000424958 2230 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms