Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AL513523.2-202ENST00000427283 2040 ntBASIC14.31□□□□□ -0.12
CPNE4Q96A23 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 TSSK5P-201ENST00000423978 907 ntBASIC14.31□□□□□ -0.12
CPNE4Q96A23 HMGN1P19-201ENST00000436976 333 ntBASIC14.31□□□□□ -0.12
CPNE4Q96A23 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 AC004890.2-204ENST00000481968 304 ntBASIC14.31□□□□□ -0.12
CPNE4Q96A23 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 ZNF890P-202ENST00000530367 1156 ntBASIC14.31□□□□□ -0.12
CPNE4Q96A23 SPCS2P1-201ENST00000561636 679 ntBASIC14.31□□□□□ -0.12
CPNE4Q96A23 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 AL096865.1-201ENST00000606796 927 ntBASIC14.31□□□□□ -0.12
CPNE4Q96A23 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AC022144.1-201ENST00000602255 1580 ntBASIC14.3□□□□□ -0.12
CPNE4Q96A23 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AC069224.1-201ENST00000566372 1715 ntBASIC14.3□□□□□ -0.12
CPNE4Q96A23 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.3□□□□□ -0.12
CPNE4Q96A23 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 AC023824.1-201ENST00000562945 2975 ntBASIC14.3□□□□□ -0.12
CPNE4Q96A23 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE4Q96A23 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CPNE4Q96A23 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE4Q96A23 NORAD-201ENST00000565493 5339 ntBASIC14.29□□□□□ -0.12
CPNE4Q96A23 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms