Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.52■□□□□ 0.08
NCLNQ969V3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.52■□□□□ 0.08
NCLNQ969V3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
NCLNQ969V3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 AC092474.2-201ENST00000424288 719 ntBASIC15.52■□□□□ 0.08
NCLNQ969V3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.52■□□□□ 0.08
NCLNQ969V3 DNAJB3-202ENST00000449667 1266 ntBASIC15.52■□□□□ 0.08
NCLNQ969V3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.52■□□□□ 0.08
NCLNQ969V3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.52■□□□□ 0.08
NCLNQ969V3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.52■□□□□ 0.08
NCLNQ969V3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.52■□□□□ 0.08
NCLNQ969V3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.52■□□□□ 0.08
NCLNQ969V3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.52■□□□□ 0.08
NCLNQ969V3 RARRES2P8-201ENST00000566335 367 ntBASIC15.52■□□□□ 0.08
NCLNQ969V3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.52■□□□□ 0.08
NCLNQ969V3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NCLNQ969V3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NCLNQ969V3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.52■□□□□ 0.07
NCLNQ969V3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.52■□□□□ 0.07
NCLNQ969V3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.52■□□□□ 0.07
NCLNQ969V3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.52■□□□□ 0.07
NCLNQ969V3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NCLNQ969V3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.52■□□□□ 0.07
NCLNQ969V3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
NCLNQ969V3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCLNQ969V3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NCLNQ969V3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NCLNQ969V3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
NCLNQ969V3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NCLNQ969V3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NCLNQ969V3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.51■□□□□ 0.07
NCLNQ969V3 ADH5P3-201ENST00000433842 1137 ntBASIC15.51■□□□□ 0.07
NCLNQ969V3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.51■□□□□ 0.07
NCLNQ969V3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.51■□□□□ 0.07
NCLNQ969V3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.51■□□□□ 0.07
NCLNQ969V3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NCLNQ969V3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NCLNQ969V3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 SNHG9-202ENST00000564014 471 ntBASIC15.51■□□□□ 0.07
NCLNQ969V3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 AC021097.1-201ENST00000607902 574 ntBASIC15.51■□□□□ 0.07
NCLNQ969V3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.51■□□□□ 0.07
NCLNQ969V3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NCLNQ969V3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.51■□□□□ 0.07
NCLNQ969V3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.51■□□□□ 0.07
NCLNQ969V3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCLNQ969V3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NCLNQ969V3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
NCLNQ969V3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.5■□□□□ 0.07
NCLNQ969V3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 MIR648-201ENST00000385046 94 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms