Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIPK4Q8NE63 AC005622.1-201ENST00000636801 1703 ntBASIC15.54■□□□□ 0.08
HIPK4Q8NE63 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
HIPK4Q8NE63 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIPK4Q8NE63 AC079781.5-202ENST00000641784 3743 ntBASIC15.54■□□□□ 0.08
HIPK4Q8NE63 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIPK4Q8NE63 SLC22A20-204ENST00000530038 1673 ntBASIC15.54■□□□□ 0.08
HIPK4Q8NE63 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIPK4Q8NE63 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIPK4Q8NE63 AC007191.1-201ENST00000623179 2995 ntBASIC15.54■□□□□ 0.08
HIPK4Q8NE63 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
HIPK4Q8NE63 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 AL592424.1-201ENST00000563624 1536 ntBASIC15.53■□□□□ 0.08
HIPK4Q8NE63 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 PGM5P2-202ENST00000637225 1043 ntBASIC15.53■□□□□ 0.08
HIPK4Q8NE63 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 AC006504.4-201ENST00000592118 1568 ntBASIC15.53■□□□□ 0.08
HIPK4Q8NE63 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIPK4Q8NE63 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 AC005840.4-201ENST00000541242 2494 ntBASIC15.52■□□□□ 0.08
HIPK4Q8NE63 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 AC092127.1-201ENST00000567093 3455 ntBASIC15.52■□□□□ 0.08
HIPK4Q8NE63 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 LAGE3P1-201ENST00000425356 484 ntBASIC15.52■□□□□ 0.08
HIPK4Q8NE63 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 AC087641.1-201ENST00000557561 1021 ntBASIC15.52■□□□□ 0.08
HIPK4Q8NE63 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 AC025062.2-201ENST00000605477 670 ntBASIC15.52■□□□□ 0.08
HIPK4Q8NE63 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIPK4Q8NE63 REXO1L6P-202ENST00000619970 1078 ntBASIC15.52■□□□□ 0.08
HIPK4Q8NE63 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms