Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 FO393414.2-201ENST00000405153 598 ntBASIC14.41□□□□□ -0.1
ATG4DQ86TL0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.41□□□□□ -0.1
ATG4DQ86TL0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.41□□□□□ -0.1
ATG4DQ86TL0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ATG4DQ86TL0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 KRT8P12-202ENST00000472924 1397 ntBASIC14.4□□□□□ -0.1
ATG4DQ86TL0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 MTND6P24-201ENST00000440466 518 ntBASIC14.4□□□□□ -0.1
ATG4DQ86TL0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 AC127383.1-201ENST00000444697 1800 ntBASIC14.4□□□□□ -0.1
ATG4DQ86TL0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 AC009090.5-201ENST00000624886 2285 ntBASIC14.4□□□□□ -0.1
ATG4DQ86TL0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATG4DQ86TL0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.39□□□□□ -0.11
ATG4DQ86TL0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.39□□□□□ -0.11
ATG4DQ86TL0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ATG4DQ86TL0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATG4DQ86TL0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.39□□□□□ -0.11
ATG4DQ86TL0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATG4DQ86TL0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms