Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC149Q6ZUS6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 KRT18P64-201ENST00000434946 1219 ntBASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 RPL7P3-201ENST00000441388 714 ntBASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 HNRNPUP1-201ENST00000554987 333 ntBASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 AL049840.4-201ENST00000602422 811 ntBASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 AC068587.10-201ENST00000641210 219 ntBASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC149Q6ZUS6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 C1QBPP1-201ENST00000400117 770 ntBASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 AC124283.3-201ENST00000570869 594 ntBASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 AC103810.3-201ENST00000583567 96 ntBASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC149Q6ZUS6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms