Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 KRT18P13-201ENST00000400056 1290 ntBASIC14.4□□□□□ -0.1
SLC3A1Q07837 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 BX842568.4-201ENST00000421222 227 ntBASIC14.4□□□□□ -0.1
SLC3A1Q07837 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 AC023511.2-201ENST00000618803 211 ntBASIC14.4□□□□□ -0.1
SLC3A1Q07837 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 AC007064.4-201ENST00000637740 555 ntBASIC14.4□□□□□ -0.1
SLC3A1Q07837 AC138035.3-201ENST00000622706 2791 ntBASIC14.4□□□□□ -0.1
SLC3A1Q07837 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC3A1Q07837 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC3A1Q07837 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 AC008677.1-201ENST00000519230 1561 ntBASIC14.39□□□□□ -0.11
SLC3A1Q07837 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 HCG4B-203ENST00000450128 991 ntBASIC14.39□□□□□ -0.11
SLC3A1Q07837 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 AC087481.3-201ENST00000602886 1894 ntBASIC14.39□□□□□ -0.11
SLC3A1Q07837 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC3A1Q07837 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC3A1Q07837 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC3A1Q07837 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SLC3A1Q07837 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC3A1Q07837 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC3A1Q07837 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC3A1Q07837 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC3A1Q07837 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC3A1Q07837 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC3A1Q07837 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC3A1Q07837 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC3A1Q07837 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC3A1Q07837 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC3A1Q07837 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms