Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN7AQ01118 AD000864.1-201ENST00000624076 2295 ntBASIC19.36■□□□□ 0.69
SCN7AQ01118 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 AL645937.2-201ENST00000396808 931 ntBASIC19.35■□□□□ 0.69
SCN7AQ01118 NUS1P3-201ENST00000423502 862 ntBASIC19.35■□□□□ 0.69
SCN7AQ01118 AC114812.1-204ENST00000449669 728 ntBASIC19.35■□□□□ 0.69
SCN7AQ01118 AC004066.1-201ENST00000502488 802 ntBASIC19.35■□□□□ 0.69
SCN7AQ01118 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN7AQ01118 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN7AQ01118 SAMD11P1-201ENST00000571429 661 ntBASIC19.35■□□□□ 0.69
SCN7AQ01118 RN7SL190P-201ENST00000582519 257 ntBASIC19.35■□□□□ 0.69
SCN7AQ01118 OR10B1P-201ENST00000601666 907 ntBASIC19.35■□□□□ 0.69
SCN7AQ01118 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.35■□□□□ 0.69
SCN7AQ01118 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN7AQ01118 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SCN7AQ01118 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN7AQ01118 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SCN7AQ01118 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN7AQ01118 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN7AQ01118 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN7AQ01118 COX5BP1-201ENST00000507622 393 ntBASIC19.34■□□□□ 0.69
SCN7AQ01118 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SCN7AQ01118 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.34■□□□□ 0.69
SCN7AQ01118 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
SCN7AQ01118 AP001002.3-201ENST00000623482 206 ntBASIC19.34■□□□□ 0.69
SCN7AQ01118 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN7AQ01118 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN7AQ01118 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.34■□□□□ 0.69
SCN7AQ01118 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN7AQ01118 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN7AQ01118 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SCN7AQ01118 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
SCN7AQ01118 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SCN7AQ01118 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN7AQ01118 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN7AQ01118 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SCN7AQ01118 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
SCN7AQ01118 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.33■□□□□ 0.69
SCN7AQ01118 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SCN7AQ01118 AC007274.2-201ENST00000421675 662 ntBASIC19.33■□□□□ 0.69
SCN7AQ01118 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.33■□□□□ 0.69
SCN7AQ01118 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SCN7AQ01118 IMP3P2-201ENST00000489760 475 ntBASIC19.33■□□□□ 0.69
SCN7AQ01118 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.33■□□□□ 0.69
SCN7AQ01118 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.33■□□□□ 0.69
SCN7AQ01118 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SCN7AQ01118 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.33■□□□□ 0.69
SCN7AQ01118 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SCN7AQ01118 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCN7AQ01118 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCN7AQ01118 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SCN7AQ01118 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCN7AQ01118 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SCN7AQ01118 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN7AQ01118 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SCN7AQ01118 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN7AQ01118 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN7AQ01118 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCN7AQ01118 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
SCN7AQ01118 AL136309.1-201ENST00000403917 691 ntBASIC19.33■□□□□ 0.68
SCN7AQ01118 HLA-K-203ENST00000430151 1046 ntBASIC19.33■□□□□ 0.68
SCN7AQ01118 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN7AQ01118 RN7SL574P-201ENST00000581512 297 ntBASIC19.33■□□□□ 0.68
SCN7AQ01118 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN7AQ01118 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SCN7AQ01118 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN7AQ01118 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN7AQ01118 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN7AQ01118 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCN7AQ01118 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms