Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
RPS4XP62701 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS4XP62701 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS4XP62701 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS4XP62701 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.36□□□□□ -0.11
RPS4XP62701 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 UXT-AS1-201ENST00000590504 1525 ntBASIC14.36□□□□□ -0.11
RPS4XP62701 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.36□□□□□ -0.11
RPS4XP62701 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RPS4XP62701 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.36□□□□□ -0.11
RPS4XP62701 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 INGX-202ENST00000489074 768 ntBASIC14.36□□□□□ -0.11
RPS4XP62701 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.36□□□□□ -0.11
RPS4XP62701 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.36□□□□□ -0.11
RPS4XP62701 AC069262.1-201ENST00000539058 672 ntBASIC14.36□□□□□ -0.11
RPS4XP62701 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.36□□□□□ -0.11
RPS4XP62701 DUX4L27-201ENST00000554796 1261 ntBASIC14.36□□□□□ -0.11
RPS4XP62701 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.36□□□□□ -0.11
RPS4XP62701 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.36□□□□□ -0.11
RPS4XP62701 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 TUBB3P1-201ENST00000405796 1332 ntBASIC14.36□□□□□ -0.11
RPS4XP62701 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 AC006058.4-201ENST00000624016 1670 ntBASIC14.36□□□□□ -0.11
RPS4XP62701 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPS4XP62701 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPS4XP62701 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 KRT8P37-201ENST00000451609 1420 ntBASIC14.35□□□□□ -0.11
RPS4XP62701 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS4XP62701 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.35□□□□□ -0.11
RPS4XP62701 SPDYE7P-202ENST00000420373 878 ntBASIC14.35□□□□□ -0.11
RPS4XP62701 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.35□□□□□ -0.11
RPS4XP62701 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.35□□□□□ -0.11
RPS4XP62701 KLF2P3-201ENST00000451977 1087 ntBASIC14.35□□□□□ -0.11
RPS4XP62701 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS4XP62701 AC125807.1-201ENST00000483097 614 ntBASIC14.35□□□□□ -0.11
RPS4XP62701 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RPS4XP62701 SLC25A39P2-201ENST00000537614 270 ntBASIC14.35□□□□□ -0.11
RPS4XP62701 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
RPS4XP62701 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.35□□□□□ -0.11
RPS4XP62701 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms