Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
VBP1P61758 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.32□□□□□ -0.12
VBP1P61758 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.32□□□□□ -0.12
VBP1P61758 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.32□□□□□ -0.12
VBP1P61758 TSPY15P-201ENST00000457163 923 ntBASIC14.32□□□□□ -0.12
VBP1P61758 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.32□□□□□ -0.12
VBP1P61758 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.32□□□□□ -0.12
VBP1P61758 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.32□□□□□ -0.12
VBP1P61758 IGHV3-41-201ENST00000613121 348 ntBASIC14.32□□□□□ -0.12
VBP1P61758 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.32□□□□□ -0.12
VBP1P61758 AP000867.4-201ENST00000641616 219 ntBASIC14.32□□□□□ -0.12
VBP1P61758 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
VBP1P61758 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 SIGLEC16-201ENST00000599858 1437 ntBASIC14.32□□□□□ -0.12
VBP1P61758 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.32□□□□□ -0.12
VBP1P61758 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
VBP1P61758 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.31□□□□□ -0.12
VBP1P61758 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VBP1P61758 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 AC091607.1-201ENST00000490318 1060 ntBASIC14.31□□□□□ -0.12
VBP1P61758 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VBP1P61758 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.31□□□□□ -0.12
VBP1P61758 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VBP1P61758 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VBP1P61758 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
VBP1P61758 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
VBP1P61758 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
VBP1P61758 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VBP1P61758 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VBP1P61758 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.3□□□□□ -0.12
VBP1P61758 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms