Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CLDN20P56880 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN20P56880 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN20P56880 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN20P56880 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CLDN20P56880 AL592424.1-201ENST00000563624 1536 ntBASIC14.63□□□□□ -0.07
CLDN20P56880 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.63□□□□□ -0.07
CLDN20P56880 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN20P56880 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.63□□□□□ -0.07
CLDN20P56880 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CLDN20P56880 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN20P56880 AC107890.1-201ENST00000422478 521 ntBASIC14.63□□□□□ -0.07
CLDN20P56880 AL353705.2-201ENST00000428243 662 ntBASIC14.63□□□□□ -0.07
CLDN20P56880 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLDN20P56880 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.63□□□□□ -0.07
CLDN20P56880 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN20P56880 AC024267.1-201ENST00000582320 895 ntBASIC14.63□□□□□ -0.07
CLDN20P56880 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.63□□□□□ -0.07
CLDN20P56880 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.63□□□□□ -0.07
CLDN20P56880 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.63□□□□□ -0.07
CLDN20P56880 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLDN20P56880 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CLDN20P56880 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN20P56880 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.63□□□□□ -0.07
CLDN20P56880 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLDN20P56880 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CLDN20P56880 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN20P56880 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLDN20P56880 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CLDN20P56880 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN20P56880 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN20P56880 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CLDN20P56880 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN20P56880 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CLDN20P56880 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN20P56880 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN20P56880 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN20P56880 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN20P56880 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN20P56880 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN20P56880 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN20P56880 AC007967.4-201ENST00000614700 386 ntBASIC14.62□□□□□ -0.07
CLDN20P56880 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLDN20P56880 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN20P56880 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CLDN20P56880 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN20P56880 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN20P56880 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms