Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.21■□□□□ 0.03
PRIM2P49643 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.21■□□□□ 0.03
PRIM2P49643 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.21■□□□□ 0.03
PRIM2P49643 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRIM2P49643 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRIM2P49643 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRIM2P49643 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRIM2P49643 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRIM2P49643 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.21■□□□□ 0.02
PRIM2P49643 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PRIM2P49643 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRIM2P49643 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.21■□□□□ 0.02
PRIM2P49643 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
PRIM2P49643 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRIM2P49643 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRIM2P49643 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.2■□□□□ 0.02
PRIM2P49643 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.2■□□□□ 0.02
PRIM2P49643 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.2■□□□□ 0.02
PRIM2P49643 AL671277.1-201ENST00000429656 993 ntBASIC15.2■□□□□ 0.02
PRIM2P49643 FAM58CP-201ENST00000435741 640 ntBASIC15.2■□□□□ 0.02
PRIM2P49643 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 AC245100.5-201ENST00000452108 331 ntBASIC15.2■□□□□ 0.02
PRIM2P49643 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.2■□□□□ 0.02
PRIM2P49643 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.2■□□□□ 0.02
PRIM2P49643 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.2■□□□□ 0.02
PRIM2P49643 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.2■□□□□ 0.02
PRIM2P49643 AL589702.1-201ENST00000641229 1509 ntBASIC15.2■□□□□ 0.02
PRIM2P49643 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.2■□□□□ 0.02
PRIM2P49643 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.2■□□□□ 0.02
PRIM2P49643 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PRIM2P49643 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
PRIM2P49643 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRIM2P49643 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRIM2P49643 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRIM2P49643 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
PRIM2P49643 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.19■□□□□ 0.02
PRIM2P49643 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRIM2P49643 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PRIM2P49643 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 AL355306.1-201ENST00000415580 579 ntBASIC15.19■□□□□ 0.02
PRIM2P49643 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.19■□□□□ 0.02
PRIM2P49643 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRIM2P49643 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRIM2P49643 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.19■□□□□ 0.02
PRIM2P49643 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.19■□□□□ 0.02
PRIM2P49643 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRIM2P49643 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PRIM2P49643 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.18■□□□□ 0.02
PRIM2P49643 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PRIM2P49643 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms