Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RFC3P40938 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RFC3P40938 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 ME2P1-201ENST00000426028 1970 ntBASIC14.6□□□□□ -0.07
RFC3P40938 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.6□□□□□ -0.07
RFC3P40938 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.6□□□□□ -0.07
RFC3P40938 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.6□□□□□ -0.07
RFC3P40938 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
RFC3P40938 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 GAPDHP21-201ENST00000450301 1010 ntBASIC14.6□□□□□ -0.07
RFC3P40938 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 SDHAP3-202ENST00000515467 728 ntBASIC14.6□□□□□ -0.07
RFC3P40938 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.6□□□□□ -0.07
RFC3P40938 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.6□□□□□ -0.07
RFC3P40938 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 AC140912.1-201ENST00000577171 1054 ntBASIC14.6□□□□□ -0.07
RFC3P40938 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.6□□□□□ -0.07
RFC3P40938 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.6□□□□□ -0.07
RFC3P40938 AC008494.3-201ENST00000606615 944 ntBASIC14.6□□□□□ -0.07
RFC3P40938 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RFC3P40938 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RFC3P40938 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.6□□□□□ -0.07
RFC3P40938 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RFC3P40938 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.59□□□□□ -0.07
RFC3P40938 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
RFC3P40938 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 AC114501.2-201ENST00000439631 535 ntBASIC14.59□□□□□ -0.07
RFC3P40938 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.59□□□□□ -0.07
RFC3P40938 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.59□□□□□ -0.07
RFC3P40938 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 ZNF890P-202ENST00000530367 1156 ntBASIC14.59□□□□□ -0.07
RFC3P40938 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.59□□□□□ -0.07
RFC3P40938 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 WASH4P-201ENST00000564273 1246 ntBASIC14.59□□□□□ -0.07
RFC3P40938 TP53TG3HP-202ENST00000569755 579 ntBASIC14.59□□□□□ -0.07
RFC3P40938 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 SRD5A3P1-201ENST00000603021 949 ntBASIC14.59□□□□□ -0.07
RFC3P40938 CHCHD2P3-201ENST00000603038 451 ntBASIC14.59□□□□□ -0.07
RFC3P40938 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.59□□□□□ -0.07
RFC3P40938 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.59□□□□□ -0.07
RFC3P40938 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.59□□□□□ -0.07
RFC3P40938 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFC3P40938 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RFC3P40938 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms