Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDE6BP35913 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.39■□□□□ 0.69
PDE6BP35913 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE6BP35913 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.38■□□□□ 0.69
PDE6BP35913 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE6BP35913 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.38■□□□□ 0.69
PDE6BP35913 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.38■□□□□ 0.69
PDE6BP35913 HIST2H2BC-201ENST00000498492 580 ntBASIC19.38■□□□□ 0.69
PDE6BP35913 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.38■□□□□ 0.69
PDE6BP35913 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.38■□□□□ 0.69
PDE6BP35913 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.38■□□□□ 0.69
PDE6BP35913 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDE6BP35913 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.38■□□□□ 0.69
PDE6BP35913 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PDE6BP35913 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE6BP35913 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.38■□□□□ 0.69
PDE6BP35913 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDE6BP35913 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PDE6BP35913 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDE6BP35913 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE6BP35913 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.38■□□□□ 0.69
PDE6BP35913 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PDE6BP35913 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6BP35913 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PDE6BP35913 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PDE6BP35913 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6BP35913 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDE6BP35913 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.37■□□□□ 0.69
PDE6BP35913 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.37■□□□□ 0.69
PDE6BP35913 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.37■□□□□ 0.69
PDE6BP35913 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6BP35913 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.37■□□□□ 0.69
PDE6BP35913 AC105129.2-201ENST00000559536 390 ntBASIC19.37■□□□□ 0.69
PDE6BP35913 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.37■□□□□ 0.69
PDE6BP35913 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6BP35913 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.37■□□□□ 0.69
PDE6BP35913 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.37■□□□□ 0.69
PDE6BP35913 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6BP35913 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.37■□□□□ 0.69
PDE6BP35913 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDE6BP35913 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 AP001094.4-201ENST00000579008 2176 ntBASIC19.36■□□□□ 0.69
PDE6BP35913 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.36■□□□□ 0.69
PDE6BP35913 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PDE6BP35913 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.36■□□□□ 0.69
PDE6BP35913 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PDE6BP35913 ACTBP8-201ENST00000403258 1108 ntBASIC19.36■□□□□ 0.69
PDE6BP35913 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
PDE6BP35913 MIR663B-201ENST00000408361 115 ntBASIC19.36■□□□□ 0.69
PDE6BP35913 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.36■□□□□ 0.69
PDE6BP35913 POM121L10P-201ENST00000436994 1285 ntBASIC19.36■□□□□ 0.69
PDE6BP35913 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.36■□□□□ 0.69
PDE6BP35913 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.36■□□□□ 0.69
PDE6BP35913 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.36■□□□□ 0.69
PDE6BP35913 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.36■□□□□ 0.69
PDE6BP35913 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
PDE6BP35913 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDE6BP35913 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.36■□□□□ 0.69
PDE6BP35913 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.36■□□□□ 0.69
PDE6BP35913 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDE6BP35913 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms