Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA3P32297 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CHRNA3P32297 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.81■□□□□ 0.28
CHRNA3P32297 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNA3P32297 KRT8P23-201ENST00000560090 1207 ntBASIC16.81■□□□□ 0.28
CHRNA3P32297 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA3P32297 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA3P32297 AC093028.1-201ENST00000622998 982 ntBASIC16.81■□□□□ 0.28
CHRNA3P32297 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNA3P32297 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.81■□□□□ 0.28
CHRNA3P32297 LINC00628-201ENST00000628516 1289 ntBASIC16.81■□□□□ 0.28
CHRNA3P32297 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNA3P32297 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNA3P32297 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA3P32297 UXT-AS1-201ENST00000590504 1525 ntBASIC16.8■□□□□ 0.28
CHRNA3P32297 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CHRNA3P32297 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA3P32297 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA3P32297 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 AC109322.1-201ENST00000524499 1264 ntBASIC16.8■□□□□ 0.28
CHRNA3P32297 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.8■□□□□ 0.28
CHRNA3P32297 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA3P32297 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA3P32297 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHRNA3P32297 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA3P32297 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 AC138035.3-201ENST00000622706 2791 ntBASIC16.79■□□□□ 0.28
CHRNA3P32297 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 PKD1P5-201ENST00000532415 10291 ntBASIC16.79■□□□□ 0.28
CHRNA3P32297 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA3P32297 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA3P32297 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 FAM58DP-201ENST00000428076 619 ntBASIC16.79■□□□□ 0.28
CHRNA3P32297 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 KRT18P34-201ENST00000488218 1270 ntBASIC16.79■□□□□ 0.28
CHRNA3P32297 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA3P32297 RFPL4AP1-201ENST00000530883 850 ntBASIC16.79■□□□□ 0.28
CHRNA3P32297 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 AC025678.2-201ENST00000562061 970 ntBASIC16.79■□□□□ 0.28
CHRNA3P32297 AC027307.2-201ENST00000591252 911 ntBASIC16.79■□□□□ 0.28
CHRNA3P32297 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA3P32297 AC008267.7-201ENST00000624570 1194 ntBASIC16.79■□□□□ 0.28
CHRNA3P32297 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNA3P32297 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA3P32297 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA3P32297 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms