Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.08■□□□□ 0.32
HOXC8P31273 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.08■□□□□ 0.32
HOXC8P31273 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXC8P31273 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.08■□□□□ 0.32
HOXC8P31273 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXC8P31273 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXC8P31273 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 PCDHA14-201ENST00000506751 2298 ntBASIC17.08■□□□□ 0.32
HOXC8P31273 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HOXC8P31273 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HOXC8P31273 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC8P31273 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC8P31273 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXC8P31273 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC8P31273 AC148477.4-201ENST00000613430 1793 ntBASIC17.07■□□□□ 0.32
HOXC8P31273 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC8P31273 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC8P31273 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC8P31273 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC8P31273 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC8P31273 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC8P31273 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC8P31273 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC8P31273 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HOXC8P31273 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC8P31273 NUS1P3-201ENST00000423502 862 ntBASIC17.07■□□□□ 0.32
HOXC8P31273 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 AC006033.1-201ENST00000440505 426 ntBASIC17.07■□□□□ 0.32
HOXC8P31273 AL590640.2-201ENST00000457038 527 ntBASIC17.07■□□□□ 0.32
HOXC8P31273 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC8P31273 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HOXC8P31273 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC8P31273 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC8P31273 AC103810.3-201ENST00000583567 96 ntBASIC17.07■□□□□ 0.32
HOXC8P31273 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC8P31273 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HOXC8P31273 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HOXC8P31273 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC8P31273 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 AC138932.1-201ENST00000534164 6830 ntBASIC17.06■□□□□ 0.32
HOXC8P31273 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HOXC8P31273 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC8P31273 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 MIR326-201ENST00000362220 95 ntBASIC17.06■□□□□ 0.32
HOXC8P31273 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXC8P31273 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HOXC8P31273 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXC8P31273 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.06■□□□□ 0.32
HOXC8P31273 MIR3615-201ENST00000581999 87 ntBASIC17.06■□□□□ 0.32
HOXC8P31273 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 AL139099.5-201ENST00000635274 300 ntBASIC17.06■□□□□ 0.32
HOXC8P31273 AL645728.2-202ENST00000641679 227 ntBASIC17.06■□□□□ 0.32
HOXC8P31273 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HOXC8P31273 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC8P31273 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC8P31273 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms