Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
TNFSF4P23510 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 AL365209.1-201ENST00000624418 6473 ntBASIC13.65□□□□□ -0.22
TNFSF4P23510 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TNFSF4P23510 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TNFSF4P23510 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.65□□□□□ -0.22
TNFSF4P23510 MIR770-201ENST00000390219 98 ntBASIC13.65□□□□□ -0.22
TNFSF4P23510 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.65□□□□□ -0.22
TNFSF4P23510 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.65□□□□□ -0.22
TNFSF4P23510 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.65□□□□□ -0.22
TNFSF4P23510 AC055876.3-201ENST00000431496 288 ntBASIC13.65□□□□□ -0.22
TNFSF4P23510 AC241585.1-201ENST00000433527 519 ntBASIC13.65□□□□□ -0.22
TNFSF4P23510 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.65□□□□□ -0.22
TNFSF4P23510 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.65□□□□□ -0.22
TNFSF4P23510 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.65□□□□□ -0.22
TNFSF4P23510 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.65□□□□□ -0.22
TNFSF4P23510 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 AC011467.4-201ENST00000594891 528 ntBASIC13.65□□□□□ -0.22
TNFSF4P23510 AC138649.4-201ENST00000612222 287 ntBASIC13.65□□□□□ -0.22
TNFSF4P23510 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 SPDYE12P-201ENST00000618416 771 ntBASIC13.65□□□□□ -0.22
TNFSF4P23510 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.65□□□□□ -0.22
TNFSF4P23510 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.65□□□□□ -0.22
TNFSF4P23510 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.65□□□□□ -0.22
TNFSF4P23510 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.65□□□□□ -0.22
TNFSF4P23510 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TNFSF4P23510 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TNFSF4P23510 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TNFSF4P23510 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
TNFSF4P23510 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.64□□□□□ -0.23
TNFSF4P23510 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TNFSF4P23510 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TNFSF4P23510 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.64□□□□□ -0.23
TNFSF4P23510 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 KRT8P12-202ENST00000472924 1397 ntBASIC13.64□□□□□ -0.23
TNFSF4P23510 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.64□□□□□ -0.23
TNFSF4P23510 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.64□□□□□ -0.23
TNFSF4P23510 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.64□□□□□ -0.23
TNFSF4P23510 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 AL138828.2-201ENST00000615812 383 ntBASIC13.64□□□□□ -0.23
TNFSF4P23510 AL390754.1-201ENST00000619088 582 ntBASIC13.64□□□□□ -0.23
TNFSF4P23510 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 AL136379.1-201ENST00000623471 2642 ntBASIC13.64□□□□□ -0.23
TNFSF4P23510 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TNFSF4P23510 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.64□□□□□ -0.23
TNFSF4P23510 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TNFSF4P23510 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms