Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PTPRFP10586 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPRFP10586 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPRFP10586 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPRFP10586 FXNP2-201ENST00000411625 547 ntBASIC17.87■□□□□ 0.45
PTPRFP10586 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.87■□□□□ 0.45
PTPRFP10586 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPRFP10586 RN7SL574P-201ENST00000581512 297 ntBASIC17.87■□□□□ 0.45
PTPRFP10586 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPRFP10586 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.87■□□□□ 0.45
PTPRFP10586 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPRFP10586 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPRFP10586 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
PTPRFP10586 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPRFP10586 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PTPRFP10586 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPRFP10586 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PTPRFP10586 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.86■□□□□ 0.45
PTPRFP10586 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.86■□□□□ 0.45
PTPRFP10586 NKAIN1P1-201ENST00000435754 582 ntBASIC17.86■□□□□ 0.45
PTPRFP10586 AC022217.1-201ENST00000521069 738 ntBASIC17.86■□□□□ 0.45
PTPRFP10586 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPRFP10586 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.86■□□□□ 0.45
PTPRFP10586 AC138627.1-207ENST00000641560 1006 ntBASIC17.86■□□□□ 0.45
PTPRFP10586 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PTPRFP10586 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PTPRFP10586 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 AC015818.8-201ENST00000587907 1519 ntBASIC17.86■□□□□ 0.45
PTPRFP10586 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPRFP10586 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PTPRFP10586 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PTPRFP10586 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPRFP10586 AC104457.1-201ENST00000401024 814 ntBASIC17.86■□□□□ 0.45
PTPRFP10586 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPRFP10586 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPRFP10586 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.86■□□□□ 0.45
PTPRFP10586 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPRFP10586 ZACNP1-201ENST00000612259 710 ntBASIC17.86■□□□□ 0.45
PTPRFP10586 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPRFP10586 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PTPRFP10586 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPRFP10586 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PTPRFP10586 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPRFP10586 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPRFP10586 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PTPRFP10586 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPRFP10586 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 AC005077.2-201ENST00000449786 690 ntBASIC17.85■□□□□ 0.45
PTPRFP10586 BX284668.4-201ENST00000453917 508 ntBASIC17.85■□□□□ 0.45
PTPRFP10586 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 AC004066.1-201ENST00000502488 802 ntBASIC17.85■□□□□ 0.45
PTPRFP10586 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPRFP10586 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPRFP10586 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPRFP10586 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.85■□□□□ 0.45
PTPRFP10586 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPRFP10586 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PTPRFP10586 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.85■□□□□ 0.45
PTPRFP10586 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPRFP10586 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PTPRFP10586 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PTPRFP10586 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPRFP10586 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPRFP10586 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPRFP10586 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PTPRFP10586 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPRFP10586 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPRFP10586 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPRFP10586 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPRFP10586 UPF3AP2-201ENST00000457924 1132 ntBASIC17.84■□□□□ 0.45
PTPRFP10586 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPRFP10586 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPRFP10586 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.84■□□□□ 0.45
PTPRFP10586 RN7SL48P-201ENST00000579283 293 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms