Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
P04436 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.51□□□□□ -0.09
P04436 TARDBPP1-201ENST00000442013 1203 ntBASIC14.51□□□□□ -0.09
P04436 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.51□□□□□ -0.09
P04436 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.51□□□□□ -0.09
P04436 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
P04436 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
P04436 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.51□□□□□ -0.09
P04436 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.51□□□□□ -0.09
P04436 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.51□□□□□ -0.09
P04436 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.51□□□□□ -0.09
P04436 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.51□□□□□ -0.09
P04436 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.51□□□□□ -0.09
P04436 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
P04436 AC025048.6-201ENST00000634326 1161 ntBASIC14.51□□□□□ -0.09
P04436 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
P04436 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.51□□□□□ -0.09
P04436 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
P04436 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.51□□□□□ -0.09
P04436 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.51□□□□□ -0.09
P04436 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.51□□□□□ -0.09
P04436 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.51□□□□□ -0.09
P04436 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04436 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.5□□□□□ -0.09
P04436 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
P04436 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
P04436 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 PCDH8P1-201ENST00000428983 2773 ntBASIC14.5□□□□□ -0.09
P04436 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.5□□□□□ -0.09
P04436 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.5□□□□□ -0.09
P04436 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.5□□□□□ -0.09
P04436 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.5□□□□□ -0.09
P04436 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.5□□□□□ -0.09
P04436 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.5□□□□□ -0.09
P04436 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.5□□□□□ -0.09
P04436 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.5□□□□□ -0.09
P04436 API5-211ENST00000534695 560 ntTSL 5 BASIC14.5□□□□□ -0.09
P04436 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.5□□□□□ -0.09
P04436 AC023310.3-201ENST00000557027 670 ntBASIC14.5□□□□□ -0.09
P04436 AC100756.1-201ENST00000562736 682 ntBASIC14.5□□□□□ -0.09
P04436 AC138749.3-201ENST00000567691 622 ntBASIC14.5□□□□□ -0.09
P04436 TP53TG3HP-202ENST00000569755 579 ntBASIC14.5□□□□□ -0.09
P04436 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.5□□□□□ -0.09
P04436 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
P04436 LINC01115-203ENST00000606068 577 ntBASIC14.5□□□□□ -0.09
P04436 AC116165.1-201ENST00000611806 668 ntBASIC14.5□□□□□ -0.09
P04436 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.5□□□□□ -0.09
P04436 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
P04436 AC084018.2-201ENST00000613093 2607 ntBASIC14.5□□□□□ -0.09
P04436 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.5□□□□□ -0.09
P04436 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.5□□□□□ -0.09
P04436 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P04436 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.5□□□□□ -0.09
P04436 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
P04436 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
P04436 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
P04436 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
P04436 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
P04436 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
P04436 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
P04436 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.49□□□□□ -0.09
P04436 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
P04436 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.49□□□□□ -0.09
P04436 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.49□□□□□ -0.09
P04436 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.49□□□□□ -0.09
P04436 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
P04436 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.49□□□□□ -0.09
P04436 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.49□□□□□ -0.09
P04436 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms