Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.35■□□□□ 0.05
CPNE3O75131 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CPNE3O75131 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CPNE3O75131 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.35■□□□□ 0.05
CPNE3O75131 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CPNE3O75131 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPNE3O75131 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CPNE3O75131 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CPNE3O75131 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CPNE3O75131 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CPNE3O75131 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CPNE3O75131 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 HLA-A-202ENST00000376806 1854 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CPNE3O75131 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CPNE3O75131 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CPNE3O75131 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.34■□□□□ 0.05
CPNE3O75131 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.34■□□□□ 0.05
CPNE3O75131 AL512361.1-201ENST00000554200 418 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.34■□□□□ 0.05
CPNE3O75131 AC010336.2-201ENST00000564226 506 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.34■□□□□ 0.05
CPNE3O75131 AC025048.6-201ENST00000634326 1161 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 AC004840.1-201ENST00000636359 365 ntBASIC15.34■□□□□ 0.05
CPNE3O75131 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
CPNE3O75131 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.34■□□□□ 0.05
CPNE3O75131 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.34■□□□□ 0.05
CPNE3O75131 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CPNE3O75131 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CPNE3O75131 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPNE3O75131 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
CPNE3O75131 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
CPNE3O75131 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPNE3O75131 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPNE3O75131 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CPNE3O75131 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPNE3O75131 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CPNE3O75131 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
CPNE3O75131 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CPNE3O75131 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CPNE3O75131 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
CPNE3O75131 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.33■□□□□ 0.04
CPNE3O75131 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.33■□□□□ 0.04
CPNE3O75131 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.33■□□□□ 0.04
CPNE3O75131 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.33■□□□□ 0.04
CPNE3O75131 AP005018.1-201ENST00000525475 301 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms