Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.74
CACNA1FO60840 BAATP1-201ENST00000412284 1225 ntBASIC19.64■□□□□ 0.74
CACNA1FO60840 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.64■□□□□ 0.74
CACNA1FO60840 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.64■□□□□ 0.74
CACNA1FO60840 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1FO60840 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.64■□□□□ 0.74
CACNA1FO60840 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.64■□□□□ 0.74
CACNA1FO60840 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.64■□□□□ 0.74
CACNA1FO60840 DUX4L47-201ENST00000566374 394 ntBASIC19.64■□□□□ 0.74
CACNA1FO60840 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.64■□□□□ 0.74
CACNA1FO60840 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.64■□□□□ 0.74
CACNA1FO60840 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.64■□□□□ 0.74
CACNA1FO60840 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.64■□□□□ 0.74
CACNA1FO60840 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.64■□□□□ 0.74
CACNA1FO60840 AC136621.1-201ENST00000624017 2304 ntBASIC19.64■□□□□ 0.74
CACNA1FO60840 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1FO60840 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1FO60840 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1FO60840 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1FO60840 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CACNA1FO60840 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CACNA1FO60840 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
CACNA1FO60840 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CACNA1FO60840 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.64■□□□□ 0.73
CACNA1FO60840 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 SSR4P1-203ENST00000599569 2260 ntBASIC19.64■□□□□ 0.73
CACNA1FO60840 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CACNA1FO60840 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA1FO60840 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.64■□□□□ 0.73
CACNA1FO60840 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.64■□□□□ 0.73
CACNA1FO60840 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CACNA1FO60840 AC239800.4-201ENST00000603712 296 ntBASIC19.64■□□□□ 0.73
CACNA1FO60840 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 AC079328.2-201ENST00000561241 3354 ntBASIC19.64■□□□□ 0.73
CACNA1FO60840 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.64■□□□□ 0.73
CACNA1FO60840 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1FO60840 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CACNA1FO60840 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 TNRC18P3-201ENST00000441896 2691 ntBASIC19.63■□□□□ 0.73
CACNA1FO60840 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA1FO60840 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 KRT17P7-201ENST00000451704 1104 ntBASIC19.63■□□□□ 0.73
CACNA1FO60840 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.63■□□□□ 0.73
CACNA1FO60840 AC011495.1-201ENST00000498085 584 ntBASIC19.63■□□□□ 0.73
CACNA1FO60840 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.63■□□□□ 0.73
CACNA1FO60840 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.63■□□□□ 0.73
CACNA1FO60840 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA1FO60840 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA1FO60840 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CACNA1FO60840 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CACNA1FO60840 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA1FO60840 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CACNA1FO60840 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.63■□□□□ 0.73
CACNA1FO60840 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.63■□□□□ 0.73
CACNA1FO60840 EIF3FP3-201ENST00000434851 1086 ntBASIC19.63■□□□□ 0.73
CACNA1FO60840 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.63■□□□□ 0.73
CACNA1FO60840 ENPP7P5-201ENST00000541031 1031 ntBASIC19.63■□□□□ 0.73
CACNA1FO60840 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.63■□□□□ 0.73
CACNA1FO60840 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA1FO60840 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA1FO60840 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 AC063926.2-201ENST00000623766 1308 ntBASIC19.62■□□□□ 0.73
CACNA1FO60840 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA1FO60840 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CACNA1FO60840 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms