Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.48■□□□□ 0.55
CTNND1O60716 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.48■□□□□ 0.55
CTNND1O60716 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.48■□□□□ 0.55
CTNND1O60716 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.48■□□□□ 0.55
CTNND1O60716 MSTO2P-201ENST00000314835 1709 ntBASIC18.48■□□□□ 0.55
CTNND1O60716 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.48■□□□□ 0.55
CTNND1O60716 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CTNND1O60716 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.48■□□□□ 0.55
CTNND1O60716 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTNND1O60716 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTNND1O60716 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 AC092171.3-201ENST00000610122 2651 ntBASIC18.47■□□□□ 0.55
CTNND1O60716 AC008894.3-201ENST00000624324 3103 ntBASIC18.47■□□□□ 0.55
CTNND1O60716 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.47■□□□□ 0.55
CTNND1O60716 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CTNND1O60716 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.47■□□□□ 0.55
CTNND1O60716 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.47■□□□□ 0.55
CTNND1O60716 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 AC026410.3-201ENST00000514280 936 ntBASIC18.47■□□□□ 0.55
CTNND1O60716 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.47■□□□□ 0.55
CTNND1O60716 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.47■□□□□ 0.55
CTNND1O60716 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.47■□□□□ 0.55
CTNND1O60716 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.47■□□□□ 0.55
CTNND1O60716 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
CTNND1O60716 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CTNND1O60716 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CTNND1O60716 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTNND1O60716 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.47■□□□□ 0.55
CTNND1O60716 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNND1O60716 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNND1O60716 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CTNND1O60716 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNND1O60716 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CTNND1O60716 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNND1O60716 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNND1O60716 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNND1O60716 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTNND1O60716 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNND1O60716 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.46■□□□□ 0.55
CTNND1O60716 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CTNND1O60716 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNND1O60716 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.46■□□□□ 0.55
CTNND1O60716 AC079316.1-201ENST00000548397 411 ntBASIC18.46■□□□□ 0.55
CTNND1O60716 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.46■□□□□ 0.55
CTNND1O60716 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNND1O60716 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CTNND1O60716 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTNND1O60716 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.46■□□□□ 0.55
CTNND1O60716 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTNND1O60716 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.46■□□□□ 0.54
CTNND1O60716 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.46■□□□□ 0.54
CTNND1O60716 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNND1O60716 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CTNND1O60716 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CTNND1O60716 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTNND1O60716 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNND1O60716 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNND1O60716 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNND1O60716 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CTNND1O60716 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CTNND1O60716 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTNND1O60716 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.45■□□□□ 0.54
CTNND1O60716 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CTNND1O60716 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNND1O60716 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.45■□□□□ 0.54
CTNND1O60716 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CTNND1O60716 BRWD1P1-201ENST00000401091 371 ntBASIC18.45■□□□□ 0.54
CTNND1O60716 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.45■□□□□ 0.54
CTNND1O60716 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.45■□□□□ 0.54
CTNND1O60716 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms