Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC027369.6-201ENST00000525520 931 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.6■□□□□ 0.73
SMARCA5O60264 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.6■□□□□ 0.73
SMARCA5O60264 AL390955.2-201ENST00000603032 514 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 AC073592.8-201ENST00000624126 511 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCA5O60264 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 AP002414.2-201ENST00000591780 3365 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 DBET-201ENST00000630918 3363 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SMARCA5O60264 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.6■□□□□ 0.73
SMARCA5O60264 AC020658.6-201ENST00000623564 1870 ntBASIC19.6■□□□□ 0.73
SMARCA5O60264 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCA5O60264 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCA5O60264 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCA5O60264 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.59■□□□□ 0.73
SMARCA5O60264 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.59■□□□□ 0.73
SMARCA5O60264 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.59■□□□□ 0.73
SMARCA5O60264 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.59■□□□□ 0.73
SMARCA5O60264 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMARCA5O60264 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMARCA5O60264 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.59■□□□□ 0.73
SMARCA5O60264 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMARCA5O60264 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMARCA5O60264 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 MIR943-201ENST00000401286 94 ntBASIC19.59■□□□□ 0.73
SMARCA5O60264 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.59■□□□□ 0.73
SMARCA5O60264 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMARCA5O60264 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.59■□□□□ 0.73
SMARCA5O60264 AC140878.1-201ENST00000565277 250 ntBASIC19.59■□□□□ 0.73
SMARCA5O60264 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.59■□□□□ 0.73
SMARCA5O60264 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.59■□□□□ 0.73
SMARCA5O60264 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.59■□□□□ 0.73
SMARCA5O60264 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.59■□□□□ 0.73
SMARCA5O60264 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCA5O60264 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMARCA5O60264 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMARCA5O60264 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMARCA5O60264 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.58■□□□□ 0.73
SMARCA5O60264 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SMARCA5O60264 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.58■□□□□ 0.73
SMARCA5O60264 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMARCA5O60264 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SMARCA5O60264 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
SMARCA5O60264 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMARCA5O60264 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.58■□□□□ 0.73
SMARCA5O60264 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMARCA5O60264 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.58■□□□□ 0.73
SMARCA5O60264 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMARCA5O60264 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.58■□□□□ 0.73
SMARCA5O60264 AL645939.2-201ENST00000427340 991 ntBASIC19.58■□□□□ 0.72
SMARCA5O60264 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.58■□□□□ 0.72
SMARCA5O60264 HLA-V-204ENST00000476601 1289 ntBASIC19.58■□□□□ 0.72
SMARCA5O60264 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.58■□□□□ 0.72
SMARCA5O60264 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCA5O60264 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.58■□□□□ 0.72
SMARCA5O60264 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.58■□□□□ 0.72
SMARCA5O60264 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.58■□□□□ 0.72
SMARCA5O60264 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.58■□□□□ 0.72
SMARCA5O60264 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.58■□□□□ 0.72
SMARCA5O60264 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCA5O60264 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCA5O60264 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.58■□□□□ 0.72
SMARCA5O60264 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCA5O60264 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.58■□□□□ 0.72
SMARCA5O60264 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.58■□□□□ 0.72
SMARCA5O60264 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.57■□□□□ 0.72
SMARCA5O60264 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.57■□□□□ 0.72
SMARCA5O60264 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SMARCA5O60264 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.57■□□□□ 0.72
SMARCA5O60264 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
SMARCA5O60264 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.57■□□□□ 0.72
SMARCA5O60264 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCA5O60264 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.57■□□□□ 0.72
SMARCA5O60264 AC136604.1-201ENST00000418535 575 ntBASIC19.57■□□□□ 0.72
SMARCA5O60264 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms