Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.05□□□□□ -0.32
SSSCA1O60232 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.05□□□□□ -0.32
SSSCA1O60232 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.05□□□□□ -0.32
SSSCA1O60232 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
SSSCA1O60232 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
SSSCA1O60232 AC138894.3-201ENST00000603787 634 ntBASIC13.05□□□□□ -0.32
SSSCA1O60232 AC069148.1-201ENST00000608741 768 ntBASIC13.05□□□□□ -0.32
SSSCA1O60232 AC007191.1-201ENST00000623179 2995 ntBASIC13.05□□□□□ -0.32
SSSCA1O60232 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSSCA1O60232 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 CICP4-201ENST00000447359 2812 ntBASIC13.04□□□□□ -0.32
SSSCA1O60232 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SSSCA1O60232 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 AC006504.4-201ENST00000592118 1568 ntBASIC13.04□□□□□ -0.32
SSSCA1O60232 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SSSCA1O60232 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.04□□□□□ -0.32
SSSCA1O60232 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 RBM17P3-201ENST00000417687 1192 ntBASIC13.04□□□□□ -0.32
SSSCA1O60232 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.04□□□□□ -0.32
SSSCA1O60232 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.04□□□□□ -0.32
SSSCA1O60232 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.04□□□□□ -0.32
SSSCA1O60232 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.04□□□□□ -0.32
SSSCA1O60232 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.04□□□□□ -0.32
SSSCA1O60232 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.04□□□□□ -0.32
SSSCA1O60232 AC021097.1-201ENST00000607902 574 ntBASIC13.04□□□□□ -0.32
SSSCA1O60232 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.04□□□□□ -0.32
SSSCA1O60232 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.04□□□□□ -0.32
SSSCA1O60232 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.04□□□□□ -0.32
SSSCA1O60232 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
SSSCA1O60232 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.04□□□□□ -0.32
SSSCA1O60232 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SSSCA1O60232 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.03□□□□□ -0.32
SSSCA1O60232 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SSSCA1O60232 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SSSCA1O60232 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms