Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
PAX4O43316 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.46□□□□□ -0.58
PAX4O43316 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
PAX4O43316 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
PAX4O43316 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.46□□□□□ -0.58
PAX4O43316 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 AL513523.2-202ENST00000427283 2040 ntBASIC11.45□□□□□ -0.58
PAX4O43316 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 PAUPAR-201ENST00000630360 2965 ntBASIC11.45□□□□□ -0.58
PAX4O43316 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.45□□□□□ -0.58
PAX4O43316 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.45□□□□□ -0.58
PAX4O43316 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.45□□□□□ -0.58
PAX4O43316 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.45□□□□□ -0.58
PAX4O43316 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 AP000344.2-201ENST00000512987 629 ntBASIC11.45□□□□□ -0.58
PAX4O43316 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 RNA5SP410-201ENST00000516285 106 ntBASIC11.45□□□□□ -0.58
PAX4O43316 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.45□□□□□ -0.58
PAX4O43316 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 SNHG9-202ENST00000564014 471 ntBASIC11.45□□□□□ -0.58
PAX4O43316 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.45□□□□□ -0.58
PAX4O43316 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 AC073389.1-201ENST00000595595 795 ntBASIC11.45□□□□□ -0.58
PAX4O43316 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.45□□□□□ -0.58
PAX4O43316 AC105339.1-204ENST00000636249 355 ntBASIC11.45□□□□□ -0.58
PAX4O43316 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PAX4O43316 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.45□□□□□ -0.58
PAX4O43316 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.45□□□□□ -0.58
PAX4O43316 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PAX4O43316 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.44□□□□□ -0.58
PAX4O43316 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PAX4O43316 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PAX4O43316 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.44□□□□□ -0.58
PAX4O43316 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.44□□□□□ -0.58
PAX4O43316 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.44□□□□□ -0.58
PAX4O43316 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.44□□□□□ -0.58
PAX4O43316 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
PAX4O43316 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PAX4O43316 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PAX4O43316 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.44□□□□□ -0.58
PAX4O43316 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.44□□□□□ -0.58
PAX4O43316 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PAX4O43316 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PAX4O43316 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PAX4O43316 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms