Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC092910.1-201ENST00000482027 1129 ntBASIC15.52■□□□□ 0.08
HDAC3O15379 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HDAC3O15379 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.52■□□□□ 0.08
HDAC3O15379 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.52■□□□□ 0.08
HDAC3O15379 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.52■□□□□ 0.08
HDAC3O15379 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.52■□□□□ 0.08
HDAC3O15379 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.52■□□□□ 0.08
HDAC3O15379 AC010507.1-201ENST00000633895 436 ntBASIC15.52■□□□□ 0.08
HDAC3O15379 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HDAC3O15379 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 REXO1L1P-202ENST00000608646 1974 ntBASIC15.52■□□□□ 0.07
HDAC3O15379 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 BNIP3P1-202ENST00000550043 1585 ntBASIC15.52■□□□□ 0.07
HDAC3O15379 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
HDAC3O15379 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HDAC3O15379 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HDAC3O15379 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.52■□□□□ 0.07
HDAC3O15379 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.52■□□□□ 0.07
HDAC3O15379 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 SNX18-202ENST00000343017 3140 ntBASIC15.52■□□□□ 0.07
HDAC3O15379 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HDAC3O15379 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
HDAC3O15379 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 AC026748.1-201ENST00000624349 3251 ntBASIC15.51■□□□□ 0.07
HDAC3O15379 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.51■□□□□ 0.07
HDAC3O15379 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.51■□□□□ 0.07
HDAC3O15379 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 CRYGEP-201ENST00000412192 528 ntBASIC15.51■□□□□ 0.07
HDAC3O15379 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.51■□□□□ 0.07
HDAC3O15379 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.51■□□□□ 0.07
HDAC3O15379 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.51■□□□□ 0.07
HDAC3O15379 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.51■□□□□ 0.07
HDAC3O15379 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 AL390755.1-201ENST00000623716 2027 ntBASIC15.51■□□□□ 0.07
HDAC3O15379 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HDAC3O15379 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.51■□□□□ 0.07
HDAC3O15379 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HDAC3O15379 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.51■□□□□ 0.07
HDAC3O15379 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
HDAC3O15379 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HDAC3O15379 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HDAC3O15379 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.5■□□□□ 0.07
HDAC3O15379 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.5■□□□□ 0.07
HDAC3O15379 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HDAC3O15379 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.5■□□□□ 0.07
HDAC3O15379 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.5■□□□□ 0.07
HDAC3O15379 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.5■□□□□ 0.07
HDAC3O15379 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HDAC3O15379 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HDAC3O15379 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HDAC3O15379 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.5■□□□□ 0.07
HDAC3O15379 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.5■□□□□ 0.07
HDAC3O15379 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HDAC3O15379 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.5■□□□□ 0.07
HDAC3O15379 AL121912.1-201ENST00000603683 238 ntBASIC15.5■□□□□ 0.07
HDAC3O15379 AC023141.13-201ENST00000604991 943 ntBASIC15.5■□□□□ 0.07
HDAC3O15379 AC148477.8-201ENST00000624298 468 ntBASIC15.5■□□□□ 0.07
HDAC3O15379 AC007064.4-201ENST00000637740 555 ntBASIC15.5■□□□□ 0.07
HDAC3O15379 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
HDAC3O15379 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms