Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SOX1O00570 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.67■□□□□ 0.26
SOX1O00570 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.67■□□□□ 0.26
SOX1O00570 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX1O00570 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.66■□□□□ 0.26
SOX1O00570 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SOX1O00570 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.66■□□□□ 0.26
SOX1O00570 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SOX1O00570 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SOX1O00570 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.66■□□□□ 0.26
SOX1O00570 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 ACTBP8-201ENST00000403258 1108 ntBASIC16.66■□□□□ 0.26
SOX1O00570 ACTBP7-201ENST00000418351 1124 ntBASIC16.66■□□□□ 0.26
SOX1O00570 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.66■□□□□ 0.26
SOX1O00570 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.66■□□□□ 0.26
SOX1O00570 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.66■□□□□ 0.26
SOX1O00570 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 AC103810.10-201ENST00000606504 343 ntBASIC16.66■□□□□ 0.26
SOX1O00570 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 AL023803.2-201ENST00000620080 638 ntBASIC16.66■□□□□ 0.26
SOX1O00570 AC007718.1-201ENST00000621078 280 ntBASIC16.66■□□□□ 0.26
SOX1O00570 AL132780.4-201ENST00000624870 1135 ntBASIC16.66■□□□□ 0.26
SOX1O00570 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.66■□□□□ 0.26
SOX1O00570 AC004923.1-202ENST00000642106 209 ntBASIC16.66■□□□□ 0.26
SOX1O00570 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SOX1O00570 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SOX1O00570 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SOX1O00570 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SOX1O00570 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.65■□□□□ 0.26
SOX1O00570 FAM8A4P-201ENST00000435433 1213 ntBASIC16.65■□□□□ 0.26
SOX1O00570 DDX39AP1-201ENST00000445147 1181 ntBASIC16.65■□□□□ 0.26
SOX1O00570 AC073150.1-201ENST00000450406 1084 ntBASIC16.65■□□□□ 0.26
SOX1O00570 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 MARK2P5-201ENST00000507649 634 ntBASIC16.65■□□□□ 0.26
SOX1O00570 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.65■□□□□ 0.26
SOX1O00570 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
SOX1O00570 AC124947.2-201ENST00000547118 1133 ntBASIC16.65■□□□□ 0.26
SOX1O00570 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 SAMD11P1-201ENST00000571429 661 ntBASIC16.65■□□□□ 0.26
SOX1O00570 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.65■□□□□ 0.26
SOX1O00570 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 AL161773.1-201ENST00000624845 863 ntBASIC16.65■□□□□ 0.26
SOX1O00570 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SOX1O00570 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX1O00570 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX1O00570 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
SOX1O00570 AC092053.1-201ENST00000605787 1936 ntBASIC16.64■□□□□ 0.26
SOX1O00570 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SOX1O00570 BNIP3P1-202ENST00000550043 1585 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms