Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 ME2P1-201ENST00000426028 1970 ntBASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 CALR4P-201ENST00000431943 946 ntBASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 AC007969.1-201ENST00000433675 447 ntBASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 AC018892.3-201ENST00000623986 2499 ntBASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HCFC2Q9Y5Z7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AC092506.1-202ENST00000401022 528 ntBASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 KRT18P25-201ENST00000508931 1278 ntBASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 MIR4741-201ENST00000579822 90 ntBASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AC145423.3-201ENST00000615987 467 ntBASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HCFC2Q9Y5Z7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms