Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC104784.1-201ENST00000473096 294 ntBASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 SERPINA13P-202ENST00000478994 924 ntBASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 FGFR3P5-201ENST00000564496 886 ntBASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 AC005622.1-201ENST00000636801 1703 ntBASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 LINC01144-201ENST00000626198 1710 ntBASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 AP001582.1-201ENST00000525856 295 ntBASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 KRT8P35-201ENST00000483942 1338 ntBASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
ZC3H4Q9UPT8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AC136604.1-201ENST00000418535 575 ntBASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 EEF1DP6-201ENST00000449232 372 ntBASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AL590640.2-201ENST00000457038 527 ntBASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 HLA-C-210ENST00000640219 976 ntBASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.04■□□□□ 0.64
ZC3H4Q9UPT8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms