Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 RPL17P11-201ENST00000417593 544 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AL355334.1-201ENST00000417713 215 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 MTCYBP15-201ENST00000433123 1127 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AKR7A2P1-201ENST00000460134 915 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 MIR5189-201ENST00000577370 114 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 CYP2A7P1-201ENST00000595391 815 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC021097.1-201ENST00000607902 574 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC023510.2-201ENST00000622162 746 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 AC108860.2-201ENST00000562760 2183 ntBASIC15.18■□□□□ 0.02
LHX6Q9UPM6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LHX6Q9UPM6 MTCO1P15-201ENST00000529569 1526 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AC093525.9-201ENST00000624961 1746 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AC005077.2-201ENST00000449786 690 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 CAB39P1-201ENST00000502277 460 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 HAUS1P1-201ENST00000505275 832 ntBASIC15.17■□□□□ 0.02
LHX6Q9UPM6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LHX6Q9UPM6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms