Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 AC026954.1-201ENST00000429771 1293 ntBASIC16.78■□□□□ 0.28
TLR9Q9NR96 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 RN7SL560P-201ENST00000577943 264 ntBASIC16.78■□□□□ 0.28
TLR9Q9NR96 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR9Q9NR96 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR9Q9NR96 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 PCDHB19P-201ENST00000570871 2371 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 AC136604.1-201ENST00000418535 575 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 AGGF1P2-201ENST00000426656 2106 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 C2orf27AP3-201ENST00000434123 579 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR9Q9NR96 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 RPL13AP20-201ENST00000459725 609 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.77■□□□□ 0.28
TLR9Q9NR96 RN7SL190P-201ENST00000582519 257 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 AL450472.2-201ENST00000603663 1156 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 AL354718.3-201ENST00000616414 581 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 CR382287.1-201ENST00000623954 586 ntBASIC16.77■□□□□ 0.28
TLR9Q9NR96 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms