Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AC006033.1-201ENST00000440505 426 ntBASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AC124283.3-201ENST00000570869 594 ntBASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 RN7SL560P-201ENST00000577943 264 ntBASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AL450472.2-201ENST00000603663 1156 ntBASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 AC018892.3-201ENST00000623986 2499 ntBASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 AC024909.3-201ENST00000611513 2257 ntBASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 RN7SL190P-201ENST00000582519 257 ntBASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 AC091271.1-201ENST00000611877 1162 ntBASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM7Q9NR12 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AC026954.1-201ENST00000429771 1293 ntBASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AC079316.1-201ENST00000548397 411 ntBASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PDLIM7Q9NR12 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms