Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 AC002472.2-201ENST00000442739 958 ntBASIC16.84■□□□□ 0.29
CYLDQ9NQC7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 SERBP1P3-201ENST00000459980 809 ntBASIC16.84■□□□□ 0.29
CYLDQ9NQC7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 RN7SL204P-201ENST00000582831 262 ntBASIC16.84■□□□□ 0.29
CYLDQ9NQC7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 AL450472.2-201ENST00000603663 1156 ntBASIC16.84■□□□□ 0.29
CYLDQ9NQC7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.84■□□□□ 0.29
CYLDQ9NQC7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CYLDQ9NQC7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CYLDQ9NQC7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.83■□□□□ 0.29
CYLDQ9NQC7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CYLDQ9NQC7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.83■□□□□ 0.29
CYLDQ9NQC7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CYLDQ9NQC7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 AC236430.1-201ENST00000402231 743 ntBASIC16.83■□□□□ 0.28
CYLDQ9NQC7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 HIST3H2BA-201ENST00000436555 524 ntBASIC16.83■□□□□ 0.28
CYLDQ9NQC7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 AC009407.1-201ENST00000568958 598 ntBASIC16.83■□□□□ 0.28
CYLDQ9NQC7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CYLDQ9NQC7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.82■□□□□ 0.28
CYLDQ9NQC7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CYLDQ9NQC7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms