Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GCM1Q9NP62 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.67□□□□□ -0.22
GCM1Q9NP62 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 AL139010.1-201ENST00000454878 894 ntBASIC13.66□□□□□ -0.22
GCM1Q9NP62 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 CYMP-203ENST00000474680 1263 ntBASIC13.66□□□□□ -0.22
GCM1Q9NP62 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 AC069120.2-201ENST00000524091 540 ntBASIC13.66□□□□□ -0.22
GCM1Q9NP62 BANF1P1-201ENST00000553684 263 ntBASIC13.66□□□□□ -0.22
GCM1Q9NP62 AC140878.1-201ENST00000565277 250 ntBASIC13.66□□□□□ -0.22
GCM1Q9NP62 RN7SL828P-201ENST00000607615 303 ntBASIC13.66□□□□□ -0.22
GCM1Q9NP62 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 CYP2T1P-202ENST00000641596 2535 ntBASIC13.66□□□□□ -0.22
GCM1Q9NP62 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.66□□□□□ -0.22
GCM1Q9NP62 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GCM1Q9NP62 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.66□□□□□ -0.22
GCM1Q9NP62 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 MTND6P24-201ENST00000440466 518 ntBASIC13.65□□□□□ -0.22
GCM1Q9NP62 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 DUX4L27-201ENST00000554796 1261 ntBASIC13.65□□□□□ -0.22
GCM1Q9NP62 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.65□□□□□ -0.22
GCM1Q9NP62 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GCM1Q9NP62 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms