Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF304Q9HCX3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF304Q9HCX3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ZNF304Q9HCX3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SDHAP3-202ENST00000515467 728 ntBASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 AC135586.1-201ENST00000539323 574 ntBASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 AC044860.1-202ENST00000559481 777 ntBASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 AC004233.3-201ENST00000607794 1269 ntBASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF304Q9HCX3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AP001282.1-201ENST00000531301 1499 ntBASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AC023824.1-201ENST00000562945 2975 ntBASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AC004840.1-201ENST00000636359 365 ntBASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 KRT8P37-201ENST00000451609 1420 ntBASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF304Q9HCX3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms