Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 AL139339.2-201ENST00000608063 657 ntBASIC14.46□□□□□ -0.09
CHD8Q9HCK8 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CHD8Q9HCK8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.46□□□□□ -0.1
CHD8Q9HCK8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHD8Q9HCK8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AQP7P5-201ENST00000428759 1049 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AQP7P4-201ENST00000447083 1042 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AQP7P2-201ENST00000453967 1041 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 MIR4522-201ENST00000584932 87 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 PEBP1P2-201ENST00000603980 558 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AQP7P3-201ENST00000624547 1041 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AL627230.2-201ENST00000613254 655 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AP000974.1-201ENST00000623909 2387 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AC098818.2-201ENST00000564925 2320 ntBASIC14.45□□□□□ -0.1
CHD8Q9HCK8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 NDUFS6P1-201ENST00000485187 316 ntBASIC14.44□□□□□ -0.1
CHD8Q9HCK8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 AC015912.3-201ENST00000619432 348 ntBASIC14.44□□□□□ -0.1
CHD8Q9HCK8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 ABALON-201ENST00000629058 1903 ntBASIC14.44□□□□□ -0.1
CHD8Q9HCK8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 GCSHP3-201ENST00000431120 391 ntBASIC14.44□□□□□ -0.1
CHD8Q9HCK8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 AC022966.2-201ENST00000587434 367 ntBASIC14.44□□□□□ -0.1
CHD8Q9HCK8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 AC015909.3-201ENST00000572855 1794 ntBASIC14.44□□□□□ -0.1
CHD8Q9HCK8 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.44□□□□□ -0.1
CHD8Q9HCK8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD8Q9HCK8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms