Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH2D4AQ9H788 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 ACA64.2-201ENST00000459014 129 ntBASIC18.48■□□□□ 0.55
SH2D4AQ9H788 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D4AQ9H788 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 AC006449.5-201ENST00000610658 2098 ntBASIC18.47■□□□□ 0.55
SH2D4AQ9H788 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 AC079776.1-201ENST00000401540 1152 ntBASIC18.47■□□□□ 0.55
SH2D4AQ9H788 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 MIR6805-201ENST00000615055 62 ntBASIC18.47■□□□□ 0.55
SH2D4AQ9H788 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 AL139384.1-201ENST00000612143 3047 ntBASIC18.47■□□□□ 0.55
SH2D4AQ9H788 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D4AQ9H788 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.46■□□□□ 0.55
SH2D4AQ9H788 BRI3BPP1-201ENST00000594224 787 ntBASIC18.46■□□□□ 0.55
SH2D4AQ9H788 AC010319.3-201ENST00000597028 470 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms