Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 MIR1909-201ENST00000411312 80 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AP006294.1-201ENST00000415407 339 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 RPL13P2-201ENST00000440687 659 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ATP5G2P4-201ENST00000442175 420 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 ZNF890P-202ENST00000530367 1156 ntBASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
KRTAP4-3Q9BYR4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms