Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 AL607033.1-201ENST00000623900 1599 ntBASIC16.53■□□□□ 0.24
LRRC3Q9BY71 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ACTG1P3-201ENST00000431775 1114 ntBASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 AC124283.3-201ENST00000570869 594 ntBASIC16.53■□□□□ 0.24
LRRC3Q9BY71 AC133539.2-201ENST00000604757 467 ntBASIC16.53■□□□□ 0.24
LRRC3Q9BY71 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 AC006449.6-201ENST00000612330 2296 ntBASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
LRRC3Q9BY71 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 AC046158.3-201ENST00000624947 2558 ntBASIC16.52■□□□□ 0.24
LRRC3Q9BY71 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 AL162726.2-201ENST00000438986 1017 ntBASIC16.52■□□□□ 0.24
LRRC3Q9BY71 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 MIR5189-201ENST00000577370 114 ntBASIC16.52■□□□□ 0.24
LRRC3Q9BY71 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRC3Q9BY71 CU634019.7-201ENST00000624153 1185 ntBASIC16.52■□□□□ 0.24
LRRC3Q9BY71 FP236241.2-201ENST00000624906 1185 ntBASIC16.52■□□□□ 0.24
LRRC3Q9BY71 COX11-210ENST00000639671 696 ntBASIC16.52■□□□□ 0.24
LRRC3Q9BY71 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC3Q9BY71 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC3Q9BY71 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms