Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 AC004987.2-201ENST00000395959 1148 ntBASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 MRPS18AP1-201ENST00000414458 589 ntBASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 AC006449.6-201ENST00000612330 2296 ntBASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.33□□□□□ -0.28
SSBP3Q9BWW4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 AC006449.5-201ENST00000610658 2098 ntBASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 BTBD7P1-201ENST00000447253 1453 ntBASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 AL512361.1-201ENST00000554200 418 ntBASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 AC010336.2-201ENST00000564226 506 ntBASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.32□□□□□ -0.28
SSBP3Q9BWW4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms