Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTCHD1Q96NR3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTCHD1Q96NR3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTCHD1Q96NR3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTCHD1Q96NR3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTCHD1Q96NR3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.04■□□□□ -0
PTCHD1Q96NR3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 FO393414.2-201ENST00000405153 598 ntBASIC15.03■□□□□ -0
PTCHD1Q96NR3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PTCHD1Q96NR3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.03■□□□□ -0
PTCHD1Q96NR3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCHD1Q96NR3 AC022144.1-201ENST00000602255 1580 ntBASIC15.02■□□□□ -0
PTCHD1Q96NR3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCHD1Q96NR3 AL365203.3-201ENST00000609742 2057 ntBASIC15.02■□□□□ -0
PTCHD1Q96NR3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCHD1Q96NR3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCHD1Q96NR3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTCHD1Q96NR3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTCHD1Q96NR3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 AL512361.1-201ENST00000554200 418 ntBASIC15.02■□□□□ -0
PTCHD1Q96NR3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 AC092364.2-202ENST00000597012 1073 ntBASIC15.02■□□□□ -0
PTCHD1Q96NR3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTCHD1Q96NR3 AL844908.2-201ENST00000609461 460 ntBASIC15.02■□□□□ -0
PTCHD1Q96NR3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.02■□□□□ -0
PTCHD1Q96NR3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.02■□□□□ -0
PTCHD1Q96NR3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 AL603832.2-201ENST00000566195 2125 ntBASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
PTCHD1Q96NR3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.01□□□□□ -0.01
PTCHD1Q96NR3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms