Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2E3Q969T4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 AP003680.1-201ENST00000598970 3660 ntBASIC15.31■□□□□ 0.04
UBE2E3Q969T4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 DNAJB3-202ENST00000449667 1266 ntBASIC15.31■□□□□ 0.04
UBE2E3Q969T4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 LINC00628-201ENST00000628516 1289 ntBASIC15.31■□□□□ 0.04
UBE2E3Q969T4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2E3Q969T4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 MTND6P24-201ENST00000440466 518 ntBASIC15.3■□□□□ 0.04
UBE2E3Q969T4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 HLA-J-203ENST00000494367 1087 ntBASIC15.3■□□□□ 0.04
UBE2E3Q969T4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 AC069262.1-201ENST00000539058 672 ntBASIC15.3■□□□□ 0.04
UBE2E3Q969T4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 BANF1P1-201ENST00000553684 263 ntBASIC15.3■□□□□ 0.04
UBE2E3Q969T4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 MIR4453-201ENST00000584019 89 ntBASIC15.3■□□□□ 0.04
UBE2E3Q969T4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2E3Q969T4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2E3Q969T4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms