Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 MEG3_2.1-201ENST00000611456 105 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 AL161773.1-201ENST00000624845 863 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 AC006453.1-201ENST00000636037 1257 ntBASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.24■□□□□ 0.19
PRUNE2Q8WUY3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AC011742.3-201ENST00000439053 820 ntBASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AC079112.1-201ENST00000454972 939 ntBASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AL160314.3-201ENST00000556041 767 ntBASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AC068587.8-201ENST00000641239 219 ntBASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AC100850.1-201ENST00000506768 649 ntBASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AP001582.1-201ENST00000525856 295 ntBASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AC060834.1-201ENST00000443027 2032 ntBASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 KRT8P4-201ENST00000509735 1454 ntBASIC16.23■□□□□ 0.19
PRUNE2Q8WUY3 AL138781.2-201ENST00000617896 1843 ntBASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 AC104073.2-201ENST00000453737 312 ntBASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 AC243562.2-201ENST00000561247 970 ntBASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 FO393412.1-201ENST00000619841 382 ntBASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 TBC1D3J-201ENST00000620719 1426 ntBASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 RN7SKP214-201ENST00000364208 315 ntBASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 RNU1-114P-201ENST00000365297 166 ntBASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRUNE2Q8WUY3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRUNE2Q8WUY3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms