Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 AC092171.3-201ENST00000610122 2651 ntBASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KLHDC9Q8NEP7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 MIR648-201ENST00000385046 94 ntBASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 MIR663B-201ENST00000408361 115 ntBASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 KLF2P2-201ENST00000416807 1039 ntBASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 AC005077.2-201ENST00000449786 690 ntBASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 RN7SL48P-201ENST00000579283 293 ntBASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 MIR4313-201ENST00000580760 101 ntBASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 RN7SL190P-201ENST00000582519 257 ntBASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.31■□□□□ 0.36
KLHDC9Q8NEP7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 AC006449.6-201ENST00000612330 2296 ntBASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 AC114812.1-204ENST00000449669 728 ntBASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KLHDC9Q8NEP7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AC106886.4-201ENST00000623557 2502 ntBASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms