Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 DPM3-202ENST00000368399 517 ntBASIC21.53■■□□□ 1.04
XRN1Q8IZH2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 AL133466.1-201ENST00000447582 150 ntBASIC21.53■■□□□ 1.04
XRN1Q8IZH2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
XRN1Q8IZH2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 AC106794.1-201ENST00000506935 792 ntBASIC21.52■■□□□ 1.04
XRN1Q8IZH2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 YRDCP1-201ENST00000621419 643 ntBASIC21.52■■□□□ 1.04
XRN1Q8IZH2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.52■■□□□ 1.04
XRN1Q8IZH2 SLC16A6P1-201ENST00000413214 1059 ntBASIC21.52■■□□□ 1.03
XRN1Q8IZH2 AC234782.1-201ENST00000451950 919 ntBASIC21.52■■□□□ 1.03
XRN1Q8IZH2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC21.52■■□□□ 1.03
XRN1Q8IZH2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.03
XRN1Q8IZH2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC21.52■■□□□ 1.03
XRN1Q8IZH2 AL161670.2-201ENST00000557650 1227 ntBASIC21.52■■□□□ 1.03
XRN1Q8IZH2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
XRN1Q8IZH2 BNIP3P13-201ENST00000599968 566 ntBASIC21.52■■□□□ 1.03
XRN1Q8IZH2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
XRN1Q8IZH2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 CEP164P1-201ENST00000455142 418 ntBASIC21.51■■□□□ 1.03
XRN1Q8IZH2 RN7SL181P-201ENST00000462921 277 ntBASIC21.51■■□□□ 1.03
XRN1Q8IZH2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 AC100757.4-201ENST00000626934 759 ntBASIC21.51■■□□□ 1.03
XRN1Q8IZH2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC21.51■■□□□ 1.03
XRN1Q8IZH2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC21.5■■□□□ 1.03
XRN1Q8IZH2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms